neuroimagen:fsl_smooth
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So you can make spatial smoothing with FSL?
You can use:
$ fslmaths original.nii -kernel gauss 2.1233226 -fmean smoothed.nii
The gaussian kernel takes its argument as sigma in mm instead of the FWHM, but you can see how to convert between these two values here: http://mathworld.wolfram.com/GaussianFunction.html
Basically, divide your FWHM (in mm) by 2.3548 to get sigma.
neuroimagen/fsl_smooth.1445597286.txt.gz · Last modified: 2020/08/04 10:45 (external edit)
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