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--- neuroimagen:afni_proc [2020/01/30 10:07]
osotolongo [Del template a los scripts]
+++ neuroimagen:afni_proc [2020/08/04 10:58] (current)
@@ Line 5: / Line 5: @@
 https://blog.cogneurostats.com/2013/05/29/single-subject-analysis-in-afni/
+**Revisar aqui primero:**
+https://afni.nimh.nih.gov/pub/dist/doc/htmldoc/programs/afni_proc.py_sphx.html
 ===== Construyendo el template =====
@@ Line 327: / Line 329: @@
 cal_min        0.0000
 file_type      NIFTI-1+
+[osotolongo@detritus sub_0001.results]$ 3dAFNItoNIFTI -prefix sub_0001_anat pb03.sub_0001.r01.volreg+tlrc
+++ 3dAFNItoNIFTI: AFNI version=AFNI_2011_12_21_1014 (Sep 30 2013) [64-bit]
+[osotolongo@detritus sub_0001.results]$ fslinfo sub_0001_anat.nii
+data_type      INT16
+dim1           54
+dim2           64
+dim3           50
+dim4           200
+datatype       4
+pixdim1        3.000000
+pixdim2        3.000000
+pixdim3        3.000000
+pixdim4        2.130000
+cal_max        0.0000
+cal_min        0.0000
+file_type      NIFTI-1+
+[osotolongo@detritus sub_0001.results]$ fslview_deprecated sub_0001_anat.nii sub_0001_fmri_clean.nii -l "render1" -b 0,6 -t 0.7
 </code>
+{{ :neuroimagen:2020-01-30-114522_grim.png |}}
+{{ :neuroimagen:2020-01-30-160900_grim.png |}}
+{{:neuroimagen:recording.mp4|}}
+===== y ahora? =====
+Postprocessing,
+  * https://blog.cogneurostats.com/2013/04/09/using-r-with-afni/
+  * https://blog.cogneurostats.com/2014/03/25/r-for-mri-lovers-part-1/
+  * https://blog.cogneurostats.com/2014/09/03/r-for-mri-lovers-part-2/
+  * https://blog.cogneurostats.com/2013/07/24/creating-volume-rois-in-afni/

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