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neuroimagen:afni_proc [2020/01/30 10:07]
osotolongo [Del template a los scripts]
neuroimagen:afni_proc [2020/01/31 22:20]
osotolongo [Resultados]
Line 5: Line 5:
 https://blog.cogneurostats.com/2013/05/29/single-subject-analysis-in-afni/ https://blog.cogneurostats.com/2013/05/29/single-subject-analysis-in-afni/
  
 +**Revisar aqui primero:**
 +https://afni.nimh.nih.gov/pub/dist/doc/htmldoc/programs/afni_proc.py_sphx.html
 ===== Construyendo el template ===== ===== Construyendo el template =====
  
Line 327: Line 329:
 cal_min        0.0000 cal_min        0.0000
 file_type      NIFTI-1+ file_type      NIFTI-1+
 +[osotolongo@detritus sub_0001.results]$ 3dAFNItoNIFTI -prefix sub_0001_anat pb03.sub_0001.r01.volreg+tlrc
 +++ 3dAFNItoNIFTI: AFNI version=AFNI_2011_12_21_1014 (Sep 30 2013) [64-bit]
 +[osotolongo@detritus sub_0001.results]$ fslinfo sub_0001_anat.nii
 +data_type      INT16
 +dim1           54
 +dim2           64
 +dim3           50
 +dim4           200
 +datatype       4
 +pixdim1        3.000000
 +pixdim2        3.000000
 +pixdim3        3.000000
 +pixdim4        2.130000
 +cal_max        0.0000
 +cal_min        0.0000
 +file_type      NIFTI-1+
 +[osotolongo@detritus sub_0001.results]$ fslview_deprecated sub_0001_anat.nii sub_0001_fmri_clean.nii -l "render1" -b 0,6 -t 0.7
 +
 </code> </code>
  
 +{{ :neuroimagen:2020-01-30-114522_grim.png |}}
 +{{ :neuroimagen:2020-01-30-160900_grim.png |}}
 +{{:neuroimagen:recording.mp4|}}
 +
 +
 +===== y ahora? =====
 +
 +Postprocessing,
  
 +  * https://blog.cogneurostats.com/2013/04/09/using-r-with-afni/
 +  * https://blog.cogneurostats.com/2014/03/25/r-for-mri-lovers-part-1/
 +  * https://blog.cogneurostats.com/2014/09/03/r-for-mri-lovers-part-2/
 +  * https://blog.cogneurostats.com/2013/07/24/creating-volume-rois-in-afni/
  
neuroimagen/afni_proc.txt ยท Last modified: 2020/08/04 10:58 (external edit)