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mbstring extension must be loaded in order to run mPDF

The set of software needed to run bioinformatic analysis is nicely described and summarized in one of GATK's articles entittled software required .

In summary, we will need the following software packages:

all of them are installed in Detritus, in the following directories:

  • bwa: /opt/exoma/bin/bwa
  • samtools: /opt/exoma/bin/samtools
  • htslib: /opt/exoma/bin/htslib-master
  • picard: /opt/exoma/bin/picard
  • GATK: /opt/exoma/bin/GATK
  • igv: /opt/exoma/bin/igv
  • R: /usr/bin/R /usr/lib64/R /usr/include/R /usr/share/R /usr/share/man/man1/R.1.gz
genetica/bioinf_process/getready.txt · Last modified: 2020/08/04 10:58 (external edit)