#!/bin/bash
code=$1
shift
sed "s/<code>/${code}/g" templates/organize.sh > org${code}.sh
chmod +x org${code}.sh
./org${code}.sh
rm org${code}.sh
sed "s/<code>/${code}/g" templates/runner.sh > fsga_${code}/run.sh
cd fsga_${code}/
chmod +x run.sh
./run.sh
cd ..
grep -v "^#" fsga_${code}/*glmdir/${code}*/*sig.cluster.summary